Information for 2-GVCCTTTGVWCTTTGV (Motif 2)

C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
Reverse Opposite:
A T C G T A G C G T C A T C G A C T G A A T C G C G A T A T C G A T G C C G T A T C G A C T G A A T C G C A T G A C G T G T A C
p-value:1e-26
log p-value:-6.054e+01
Information Content per bp:1.547
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif1297.2
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets50.9 +/- 24.6bp
Average Position of motif in Background48.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GVCCTTTGVWCTTTGV
TGGACTTTGNNCTCN--
 A C G T C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GVCCTTTGVWCTTTGV
TGGACTTTGNNCTNTG-
 A C G T C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GVCCTTTGVWCTTTGV
--CCTTTGATCTTT--
 C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GVCCTTTGVWCTTTGV
TNCCTTTGATCTTN--
 C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GVCCTTTGVWCTTTGV
AACCCTTTGATCTTT--
 A C G T C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GVCCTTTGVWCTTTGV
--CCTTTGATGT----
 C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GVCCTTTGVWCTTTGV
TNCCTTTGATGT----
 C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GVCCTTTGVWCTTTGV
--CCTTTGAWGT----
 C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GVCCTTTGVWCTTTGV
AATCCCTTTGATCTATC-
 A C G T A C G T C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GVCCTTTGVWCTTTGV
ATTTCCTTTGATCTATA-
 A C G T A C G T C A T G T G C A G T A C A T G C A G C T A G C T A C G T A T C G T A G C G C T A T A G C G A C T A G C T C A G T A C T G T A G C
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A A C G T