Information for 5-CTCTGATGGAGGC (Motif 7)

G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C
Reverse Opposite:
A C T G T A G C G T A C A G C T A G T C A G T C C G T A C A G T A T G C C G T A A C T G C T G A C T A G
p-value:1e-12
log p-value:-2.879e+01
Information Content per bp:1.780
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif57.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.1 +/- 18.9bp
Average Position of motif in Background46.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGATGGAGGC-
DCHCAGCAGGRGGCC
 A C G T G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCTGATGGAGGC
-GRTGMTRGAGCC
 G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCTGATGGAGGC---
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCTGATGGAGGC
--ATGATGCAAT-
 G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTGATGGAGGC
--MTGATGCAAT-
 G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGATGGAGGC
CCCCCTGCTGTG---
 A C G T A C G T G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCTGATGGAGGC
ANCAGCTG-----
 G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTGATGGAGGC-
--ATGATKGATGRC
 G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTGATGGAGGC-
---TAATGGCGGNC
 G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGATGGAGGC-
NCNCAGCGGGGGGTC
 A C G T G A T C A G C T A G T C C G A T A T C G G T C A A C G T A C T G T C A G C T G A A C T G A T C G A G T C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C