Information for 3-TCCGGGAAGCCCC (Motif 4)

C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C A C G T A C G T G T A C A G T C A G T C A C T G A C T G C G T A
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.951
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.3 +/- 15.2bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TCCGGGAAGCCCC
---GGAAATCCCC
 C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCCGGGAAGCCCC
TTCCNGGAAG----
 A C G T C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCCGGGAAGCCCC
-GGGGGAATCCCC
 C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCCGGGAAGCCCC
NCTTCCNGGAAGNN--
 A C G T A C G T A C G T C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCCGGGAAGCCCC-
-AGGGGAATCCCCT
 C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCCGGGAAGCCCC--
---GGGAAATCCCCN
 C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGGAAGCCCC
TTTCCNGGAAAN---
 A C G T A C G T C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCCGGGAAGCCCC
---GGAAATTCCC
 C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCCGGGAAGCCCC
---GGAAANCCCC
 C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCGGGAAGCCCC
TTTCCAGGAAA----
 A C G T A C G T C G A T A G T C A G T C A C T G A C T G A C T G G T C A C G T A A C T G A G T C A G T C A G T C A G T C
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T