Information for 2-GTGACCTTTGTCC (Motif 3)

A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G G T C A A G T C C G T A C G T A C T G A A C T G A C T G A C G T A G T C C G T A A G T C
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 15.0bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGACCTN
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGCCCTA
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGCCCCA
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Rxra/MA0512.2/Jaspar

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGACCCC
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC---
-TGACCTTTGCCCTAN
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGACCCC
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGACCCC
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTGACCTTTGTCC--
-TGACCTTTGACCTC
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GTGACCTTTGTCC
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GTGACCTTTGTCC
CTGACCTTTG---
A C T G C G A T A C T G C G T A A G T C A G T C A G C T C G A T A C G T A C T G A C G T A T G C A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T