Information for 15-STRAATATTWASA (Motif 27)

A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
Reverse Opposite:
C G A T A T C G A G C T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G C T C T G A A T G C
p-value:1e-6
log p-value:-1.390e+01
Information Content per bp:1.870
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 14.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:STRAATATTWASA--
-CTAATATTGCTAAA
 A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:STRAATATTWASA--
-CTAATATTGCTAAA
 A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:STRAATATTWASA--
----ATATTTACATA
 A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:STRAATATTWASA--
----ATATTTACATA
 A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--STRAATATTWASA
GGTTAAACATTAA--
 A C G T A C G T A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:STRAATATTWASA
ATGAATATTC---
 A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---STRAATATTWASA
CTCATGAATATTCAT-
 A C G T A C G T A C G T A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--STRAATATTWASA
AGTTAATGATTAACT
 A C G T A C G T A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---STRAATATTWASA
GANGTAATTAATTANN
 A C G T A C G T A C G T A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:STRAATATTWASA
TTAATNATTAAC-
 A T C G A G C T C T G A C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T G A A T G C C G T A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T