Information for 9-GCCATTATCT (Motif 18)

A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G C T T G C A C G T A C A G T A C T G A T C G A T G C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.856
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif60.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.4 +/- 24.7bp
Average Position of motif in Background53.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCCATTATCT
GGCCATTAAC-
 A C G T A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCCATTATCT
--YSTTATCT
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T
A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCCATTATCT-
-NCCTTATCTG
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T A C G T
A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCCATTATCT-
-NNCTTATCTN
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T A C G T
A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCCATTATCT
--TCTTATCT
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCCATTATCT---
--TCTTATCTCCC
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCCATTATCT
GTCCGCCATTA---
 A C G T A C G T A C G T A C G T A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCCATTATCT--
--YCTTATCTBN
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCCATTATCT
--TCTTATCT
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T
A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCATTATCT--
-TTCTTATCTGT
 A T C G A T G C A G T C G T C A A C G T A C G T C T G A C G A T A G T C A C G T A C G T A C G T
A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T