Information for 6-TCGTAGTCTT (Motif 13)

A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T
Reverse Opposite:
G C T A C G T A C T A G T C G A A G T C A C G T T G C A G T A C T C A G C T G A
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.682
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif170.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets50.9 +/- 23.8bp
Average Position of motif in Background52.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGTAGTCTT-
---TWGTCTGV
 A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCGTAGTCTT---
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGTAGTCTT----
NNGTANTGTTTTNC
 A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCGTAGTCTT-
-VBSYGTCTGG
 A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

SOX21/MA0866.1/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TCGTAGTCTT
AACAATGGTAGTGTT
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCGTAGTCTT--
NTTATTCGTCATNC
 A C G T A C G T A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCGTAGTCTT
CCATTGTTTT
 A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TCGTAGTCTT-
---CTGTCTGG
 A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TCGTAGTCTT-
-----GTCATN
 A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.50
Offset:-12
Orientation:reverse strand
Alignment:------------TCGTAGTCTT
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C T G A C G T T G C A T C A G A G C T A G T C G C A T C G A T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T