Information for 6-TGCAGAGGGC (Motif 8)

C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C
Reverse Opposite:
C T A G G A T C A G T C A G T C G C A T A G T C A C G T T C A G A T G C G C T A
p-value:1e-10
log p-value:-2.455e+01
Information Content per bp:1.727
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif731.1
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets44.0 +/- 26.3bp
Average Position of motif in Background52.4 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGAGGGC--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCAGAGGGC--
--CAAAGGTCAG
 C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCAGAGGGC-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGAGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCAGAGGGC
BTBRAGTGSN-
 A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCAGAGGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCAGAGGGC-
-CCAGACRSVB
 C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCAGAGGGC-
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCAGAGGGC
AACAGATGGC
 C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGAGGGC-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A