Information for 21-AMATRCGGGA (Motif 21)

T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A
Reverse Opposite:
G A C T G T A C G A T C A T G C A T C G A G T C T C G A A C G T A C G T A C G T
p-value:1e-2
log p-value:-6.329e+00
Information Content per bp:1.671
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif1358.0
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets52.2 +/- 26.2bp
Average Position of motif in Background49.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AMATRCGGGA---
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AMATRCGGGA----
NNNNATGCGGGTNNNN
 A C G T A C G T T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AMATRCGGGA-
-TATGCGGGTA
 T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AMATRCGGGA--
-CATGCGGGTAC
 T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A A C G T A C G T
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

SPDEF/MA0686.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AMATRCGGGA
TACATCCGGGT
 A C G T T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AMATRCGGGA----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AMATRCGGGA
RCATTCCWGG
 T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A
C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AMATRCGGGA
RCATTCCWGG
 T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

CENPB/MA0637.1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AMATRCGGGA
TTCGTNNNANGCGGG-
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AMATRCGGGA
ACATTCCA--
 T G C A G T C A G T C A A G C T C T A G A T G C A T C G C T A G A C T G C T G A
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T