Information for 18-GCTATATTGG (Motif 27)

T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
Reverse Opposite:
G T A C G A T C G C T A C G T A G A C T C G T A G C A T C T G A A C T G A T G C
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.677
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets57.5 +/- 25.0bp
Average Position of motif in Background60.2 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCTATATTGG
GCNGCCATCTTG-
 A C G T A C G T A C G T T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTATATTGG
NTTTTATTGG
 T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCTATATTGG
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCTATATTGG
NNTNNCAATATTAG
 A C G T A C G T A C G T A C G T T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTATATTGG
TTTTTATTGG
 T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTATATTGG--
GCTATTTTTGGM
 T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTATATTGG
GCCGCCATCTTG-
 A C G T A C G T A C G T T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTATATTGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTATATTGG--
KCTATTTTTRGH
 T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTATATTGG-
-CCATATATGG
 T A C G T G A C G A C T C G T A G C A T C T G A G A C T C A G T C A T G A C T G A C G T
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G