Information for 17-CTTAACRGGA (Motif 25)

A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A
Reverse Opposite:
A C G T A T G C G A T C G A C T A C T G A G C T G C A T G T C A G C T A T C A G
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.556
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.6 +/- 25.8bp
Average Position of motif in Background33.2 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTAACRGGA
GNCTATAAAAGG-
 A C G T A C G T A C G T A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTAACRGGA---
---ANCAGGATGT
 A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTAACRGGA----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTAACRGGA
TTTAATTGCN
 A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTAACRGGA
-CTAATKGV-
 A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTTAACRGGA--
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTAACRGGA----
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTAACRGGA---
---AACAGGAAGT
 A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTAACRGGA
GCTAATTGCT
 A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTAACRGGA---
---ANCAGGAAGT
 A G T C C G A T C A G T C G T A T C G A T G A C C T G A C T A G A T C G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T