Information for 9-TGCAAAKGRAAAC (Motif 10)

G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
Reverse Opposite:
T A C G A C G T A C G T A C G T A G T C A G T C G T A C A C G T G C A T C G A T A C T G T G A C C T G A
p-value:1e-21
log p-value:-5.025e+01
Information Content per bp:1.713
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.7 +/- 23.8bp
Average Position of motif in Background40.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCAAAKGRAAAC---
TGCCAAAATAAACANN
 G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAAKGRAAAC
ATATGCAAATNNN---
 A C G T A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAAKGRAAAC
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAKGRAAAC
WATGCAAATGAG---
 A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAAKGRAAAC
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAAKGRAAAC
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAAKGRAAAC
TTATGCAAAT------
 A C G T A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCAAAKGRAAAC
ATATGCAAAT------
 A C G T A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCAAAKGRAAAC--
-GAGAACCGAAACTG
 G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C A C G T A C G T
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCAAAKGRAAAC
TATGCWAATBAV---
 A C G T A C G T G A C T A C T G G T A C G C T A C G T A C G T A C A T G C T A G T C A G C G T A G T C A T G C A A T G C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T