Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-87 | -2.024e+02 | 0.0000 | 91.0 | 10.86% | 236.0 | 0.49% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-66 | -1.542e+02 | 0.0000 | 97.0 | 11.58% | 494.7 | 1.03% | motif file (matrix) |
svg |
3 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-45 | -1.039e+02 | 0.0000 | 102.0 | 12.17% | 988.4 | 2.06% | motif file (matrix) |
svg |
4 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-42 | -9.720e+01 | 0.0000 | 252.0 | 30.07% | 5843.3 | 12.19% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-38 | -8.826e+01 | 0.0000 | 126.0 | 15.04% | 1814.9 | 3.79% | motif file (matrix) |
svg |
6 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-34 | -7.893e+01 | 0.0000 | 103.0 | 12.29% | 1357.0 | 2.83% | motif file (matrix) |
svg |
7 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-32 | -7.484e+01 | 0.0000 | 107.0 | 12.77% | 1535.3 | 3.20% | motif file (matrix) |
svg |
8 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-31 | -7.141e+01 | 0.0000 | 100.0 | 11.93% | 1406.9 | 2.94% | motif file (matrix) |
svg |
9 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-30 | -7.040e+01 | 0.0000 | 128.0 | 15.27% | 2250.4 | 4.70% | motif file (matrix) |
svg |
10 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-28 | -6.657e+01 | 0.0000 | 188.0 | 22.43% | 4467.3 | 9.32% | motif file (matrix) |
svg |
11 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-27 | -6.421e+01 | 0.0000 | 142.0 | 16.95% | 2875.5 | 6.00% | motif file (matrix) |
svg |
12 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-25 | -5.788e+01 | 0.0000 | 333.0 | 39.74% | 11231.7 | 23.44% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-24 | -5.699e+01 | 0.0000 | 52.0 | 6.21% | 460.8 | 0.96% | motif file (matrix) |
svg |
14 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-22 | -5.179e+01 | 0.0000 | 102.0 | 12.17% | 1892.4 | 3.95% | motif file (matrix) |
svg |
15 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.360e+01 | 0.0000 | 82.0 | 9.79% | 1469.9 | 3.07% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-18 | -4.298e+01 | 0.0000 | 87.0 | 10.38% | 1644.1 | 3.43% | motif file (matrix) |
svg |
17 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-17 | -4.119e+01 | 0.0000 | 36.0 | 4.30% | 305.1 | 0.64% | motif file (matrix) |
svg |
18 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-14 | -3.436e+01 | 0.0000 | 31.0 | 3.70% | 276.7 | 0.58% | motif file (matrix) |
svg |
19 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-13 | -3.185e+01 | 0.0000 | 61.0 | 7.28% | 1112.7 | 2.32% | motif file (matrix) |
svg |
20 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-13 | -3.125e+01 | 0.0000 | 60.0 | 7.16% | 1096.8 | 2.29% | motif file (matrix) |
svg |
21 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-12 | -2.924e+01 | 0.0000 | 56.0 | 6.68% | 1023.8 | 2.14% | motif file (matrix) |
svg |
22 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.858e+01 | 0.0000 | 57.0 | 6.80% | 1072.5 | 2.24% | motif file (matrix) |
svg |
23 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-11 | -2.760e+01 | 0.0000 | 46.0 | 5.49% | 759.1 | 1.58% | motif file (matrix) |
svg |
24 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-11 | -2.553e+01 | 0.0000 | 58.0 | 6.92% | 1193.2 | 2.49% | motif file (matrix) |
svg |
25 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-10 | -2.435e+01 | 0.0000 | 70.0 | 8.35% | 1655.6 | 3.45% | motif file (matrix) |
svg |
26 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-10 | -2.341e+01 | 0.0000 | 57.0 | 6.80% | 1227.2 | 2.56% | motif file (matrix) |
svg |
27 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-9 | -2.301e+01 | 0.0000 | 24.0 | 2.86% | 260.8 | 0.54% | motif file (matrix) |
svg |
28 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-9 | -2.202e+01 | 0.0000 | 37.0 | 4.42% | 621.4 | 1.30% | motif file (matrix) |
svg |
29 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-9 | -2.201e+01 | 0.0000 | 128.0 | 15.27% | 4136.1 | 8.63% | motif file (matrix) |
svg |
30 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-9 | -2.115e+01 | 0.0000 | 30.0 | 3.58% | 440.8 | 0.92% | motif file (matrix) |
svg |
31 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-8 | -2.048e+01 | 0.0000 | 13.0 | 1.55% | 74.2 | 0.15% | motif file (matrix) |
svg |
32 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-8 | -1.981e+01 | 0.0000 | 51.0 | 6.09% | 1141.8 | 2.38% | motif file (matrix) |
svg |
33 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.940e+01 | 0.0000 | 55.0 | 6.56% | 1299.6 | 2.71% | motif file (matrix) |
svg |
34 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-7 | -1.680e+01 | 0.0000 | 55.0 | 6.56% | 1406.9 | 2.94% | motif file (matrix) |
svg |
35 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.604e+01 | 0.0000 | 58.0 | 6.92% | 1557.0 | 3.25% | motif file (matrix) |
svg |
36 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.589e+01 | 0.0000 | 76.0 | 9.07% | 2292.1 | 4.78% | motif file (matrix) |
svg |
37 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.587e+01 | 0.0000 | 58.0 | 6.92% | 1564.1 | 3.26% | motif file (matrix) |
svg |
38 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.576e+01 | 0.0000 | 30.0 | 3.58% | 563.3 | 1.18% | motif file (matrix) |
svg |
39 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-6 | -1.540e+01 | 0.0000 | 43.0 | 5.13% | 1018.6 | 2.13% | motif file (matrix) |
svg |
40 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-6 | -1.492e+01 | 0.0000 | 14.0 | 1.67% | 141.2 | 0.29% | motif file (matrix) |
svg |
41 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.455e+01 | 0.0000 | 24.0 | 2.86% | 409.5 | 0.85% | motif file (matrix) |
svg |
42 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-6 | -1.418e+01 | 0.0000 | 23.0 | 2.74% | 388.1 | 0.81% | motif file (matrix) |
svg |
43 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-5 | -1.281e+01 | 0.0000 | 97.0 | 11.58% | 3429.4 | 7.16% | motif file (matrix) |
svg |
44 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-5 | -1.250e+01 | 0.0000 | 56.0 | 6.68% | 1661.9 | 3.47% | motif file (matrix) |
svg |
45 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-5 | -1.249e+01 | 0.0000 | 42.0 | 5.01% | 1103.6 | 2.30% | motif file (matrix) |
svg |
46 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-5 | -1.245e+01 | 0.0000 | 36.0 | 4.30% | 879.3 | 1.83% | motif file (matrix) |
svg |
47 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.217e+01 | 0.0000 | 98.0 | 11.69% | 3529.8 | 7.37% | motif file (matrix) |
svg |
48 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-5 | -1.193e+01 | 0.0001 | 38.0 | 4.53% | 976.5 | 2.04% | motif file (matrix) |
svg |
49 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-5 | -1.171e+01 | 0.0001 | 100.0 | 11.93% | 3662.2 | 7.64% | motif file (matrix) |
svg |
50 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.141e+01 | 0.0001 | 33.0 | 3.94% | 811.0 | 1.69% | motif file (matrix) |
svg |
51 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.139e+01 | 0.0001 | 34.0 | 4.06% | 849.0 | 1.77% | motif file (matrix) |
svg |
52 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.097e+01 | 0.0001 | 36.0 | 4.30% | 943.8 | 1.97% | motif file (matrix) |
svg |
53 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.061e+01 | 0.0002 | 74.0 | 8.83% | 2567.3 | 5.36% | motif file (matrix) |
svg |
54 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-4 | -1.061e+01 | 0.0002 | 8.0 | 0.95% | 65.5 | 0.14% | motif file (matrix) |
svg |
55 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.041e+01 | 0.0002 | 9.0 | 1.07% | 87.7 | 0.18% | motif file (matrix) |
svg |
56 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.037e+01 | 0.0002 | 44.0 | 5.25% | 1290.2 | 2.69% | motif file (matrix) |
svg |
57 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -9.458e+00 | 0.0005 | 38.0 | 4.53% | 1097.8 | 2.29% | motif file (matrix) |
svg |
58 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -9.039e+00 | 0.0007 | 51.0 | 6.09% | 1669.7 | 3.48% | motif file (matrix) |
svg |
59 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.754e+00 | 0.0010 | 52.0 | 6.21% | 1733.0 | 3.62% | motif file (matrix) |
svg |
60 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.687e+00 | 0.0010 | 79.0 | 9.43% | 2966.2 | 6.19% | motif file (matrix) |
svg |
61 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.625e+00 | 0.0011 | 36.0 | 4.30% | 1062.7 | 2.22% | motif file (matrix) |
svg |
62 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.606e+00 | 0.0011 | 43.0 | 5.13% | 1355.4 | 2.83% | motif file (matrix) |
svg |
63 |
| GFY(?)/Promoter/Homer | 1e-3 | -8.200e+00 | 0.0016 | 11.0 | 1.31% | 171.4 | 0.36% | motif file (matrix) |
svg |
64 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.161e+00 | 0.0016 | 15.0 | 1.79% | 294.1 | 0.61% | motif file (matrix) |
svg |
65 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -8.033e+00 | 0.0018 | 21.0 | 2.51% | 506.4 | 1.06% | motif file (matrix) |
svg |
66 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.999e+00 | 0.0019 | 58.0 | 6.92% | 2060.2 | 4.30% | motif file (matrix) |
svg |
67 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -7.958e+00 | 0.0019 | 45.0 | 5.37% | 1485.6 | 3.10% | motif file (matrix) |
svg |
68 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.936e+00 | 0.0019 | 61.0 | 7.28% | 2202.7 | 4.60% | motif file (matrix) |
svg |
69 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -7.909e+00 | 0.0019 | 27.0 | 3.22% | 739.3 | 1.54% | motif file (matrix) |
svg |
70 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.800e+00 | 0.0021 | 62.0 | 7.40% | 2260.7 | 4.72% | motif file (matrix) |
svg |
71 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-3 | -7.470e+00 | 0.0029 | 18.0 | 2.15% | 419.4 | 0.88% | motif file (matrix) |
svg |
72 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.156e+00 | 0.0039 | 37.0 | 4.42% | 1195.2 | 2.49% | motif file (matrix) |
svg |
73 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.858e+00 | 0.0052 | 27.0 | 3.22% | 794.5 | 1.66% | motif file (matrix) |
svg |
74 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.818e+00 | 0.0054 | 38.0 | 4.53% | 1262.7 | 2.63% | motif file (matrix) |
svg |
75 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -6.656e+00 | 0.0062 | 9.0 | 1.07% | 146.4 | 0.31% | motif file (matrix) |
svg |
76 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -6.563e+00 | 0.0068 | 16.0 | 1.91% | 381.7 | 0.80% | motif file (matrix) |
svg |
77 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -6.472e+00 | 0.0073 | 40.0 | 4.77% | 1376.3 | 2.87% | motif file (matrix) |
svg |
78 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -6.364e+00 | 0.0080 | 25.0 | 2.98% | 740.8 | 1.55% | motif file (matrix) |
svg |
79 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -6.338e+00 | 0.0081 | 39.0 | 4.65% | 1342.0 | 2.80% | motif file (matrix) |
svg |
80 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.336e+00 | 0.0081 | 28.0 | 3.34% | 866.1 | 1.81% | motif file (matrix) |
svg |
81 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.197e+00 | 0.0091 | 35.0 | 4.18% | 1176.1 | 2.45% | motif file (matrix) |
svg |
82 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.085e+00 | 0.0101 | 41.0 | 4.89% | 1452.9 | 3.03% | motif file (matrix) |
svg |
83 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.996e+00 | 0.0109 | 79.0 | 9.43% | 3264.5 | 6.81% | motif file (matrix) |
svg |
84 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.649e+00 | 0.0153 | 33.0 | 3.94% | 1129.7 | 2.36% | motif file (matrix) |
svg |
85 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.646e+00 | 0.0153 | 70.0 | 8.35% | 2867.1 | 5.98% | motif file (matrix) |
svg |
86 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.413e+00 | 0.0189 | 94.0 | 11.22% | 4093.4 | 8.54% | motif file (matrix) |
svg |
87 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.332e+00 | 0.0202 | 80.0 | 9.55% | 3402.7 | 7.10% | motif file (matrix) |
svg |
88 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.282e+00 | 0.0210 | 5.0 | 0.60% | 62.1 | 0.13% | motif file (matrix) |
svg |
89 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.091e+00 | 0.0252 | 271.0 | 32.34% | 13581.0 | 28.34% | motif file (matrix) |
svg |
90 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -5.023e+00 | 0.0266 | 31.0 | 3.70% | 1089.9 | 2.27% | motif file (matrix) |
svg |
91 |
| ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.990e+00 | 0.0272 | 20.0 | 2.39% | 613.3 | 1.28% | motif file (matrix) |
svg |
92 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -4.883e+00 | 0.0300 | 74.0 | 8.83% | 3166.4 | 6.61% | motif file (matrix) |
svg |
93 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -4.737e+00 | 0.0343 | 49.0 | 5.85% | 1957.1 | 4.08% | motif file (matrix) |
svg |
94 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.731e+00 | 0.0343 | 5.0 | 0.60% | 71.5 | 0.15% | motif file (matrix) |
svg |