Information for 13-TGGCCGGWSKGAG (Motif 16)

A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T A C A T C G C G T A A T G C A G T C T A C G A C T G A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.886
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.5 +/- 12.8bp
Average Position of motif in Background66.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCGGWSKGAG
NAGANTGGCGGGGNGNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGGWSKGAG
TTGGCA--------
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCGGWSKGAG
NTTGGCANN------
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGGWSKGAG
CWGGCGGGAA----
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGCCGGWSKGAG
GGGCGGGAAGG--
 A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCGGWSKGAG
TGATTGGCTANN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGGWSKGAG-
GGGGCTYGKCTGGGA
 A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGGCCGGWSKGAG
BTKGGCGGGAAA---
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGGCCGGWSKGAG
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGGCCGGWSKGAG
-GGCGGGAARN--
 A C G T A C T G A C T G A G T C A G T C A C T G A T C G C G A T T A C G A C T G A C T G C G T A A C T G
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T