Information for 15-AGAGSCTRCKGAM (Motif 13)

C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A
Reverse Opposite:
A C G T A C G T A G T C G T C A A C T G A G C T C G T A A C T G A T G C A G T C A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 29.9bp
Average Position of motif in Background70.1 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGAGSCTRCKGAM
AGAGRRACAGCWGAC
 A C G T A C G T C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGSCTRCKGAM--
AGATGCTRCTRCCHT
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AGAGSCTRCKGAM---
------TGCTGACTCA
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGAGSCTRCKGAM
-TWGTCTGV----
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGAGSCTRCKGAM
TTGAGTGSTT------
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAGSCTRCKGAM---
ACATGCTACCTAATAC
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGSCTRCKGAM-
--AAAATGCTGACT
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A A C G T
A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGSCTRCKGAM
--AATTTGCTGAC
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A
A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGAGSCTRCKGAM----
--AAANTGCTGACTNAG
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGAGSCTRCKGAM-
----CCTGCTGAGH
 C G T A A C T G C G T A A C T G A T C G A G T C A C G T C T G A A G T C A C G T A C T G G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A