Information for 13-GGCTMCCTCTGCT (Motif 11)

C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T
Reverse Opposite:
G T C A A C T G T A G C C T G A T C A G T C G A C A T G A T C G A C T G T C G A C T A G A G T C A G T C
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.697
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets66.3 +/- 18.3bp
Average Position of motif in Background52.9 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCTMCCTCTGCT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GGCTMCCTCTGCT-
---------NGCTN
 C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCTMCCTCTGCT---
----CCCCCTGCTGTG
 C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCTMCCTCTGCT-----
TAGCGCCCCCTGGTGGCCA
 A C G T C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCTMCCTCTGCT
TGCTGASTCAGC-
 C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCTMCCTCTGCT
-GCTCCG------
 C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTMCCTCTGCT
GGCGCGCT-----
 C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCTMCCTCTGCT
GGCTCYAKCAYC-
 C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTMCCTCTGCT--
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

MAFG/MA0659.1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GGCTMCCTCTGCT----
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T C T A G C T A G G A T C A G C T T G A C T A G C G A T C A G C T A G T C G A C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T