Information for 4-CGMCCCYGTG (Motif 2)

A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G
Reverse Opposite:
G T A C C G T A A G T C C T G A A T C G A C T G C T A G A C T G A T G C T C A G
p-value:1e-24
log p-value:-5.540e+01
Information Content per bp:1.679
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.91%
Number of Background Sequences with motif801.6
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets51.5 +/- 26.3bp
Average Position of motif in Background49.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGMCCCYGTG---
---CCATGTGCTT
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGMCCCYGTG
--NCCACGTG
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGMCCCYGTG
--GCCACGTG
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGMCCCYGTG-
-NNCCACGTGG
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

MAX::MYC/MA0059.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGMCCCYGTG---
--ACCACGTGCTC
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGMCCCYGTG---
---NCACGTGACN
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGMCCCYGTG---
---CCACGTGGNN
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGMCCCYGTG--
--KCCACGTGAC
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

MAX/MA0058.3/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGMCCCYGTG--
--ACCACGTGCT
 A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T
A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

PB0043.1_Max_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGMCCCYGTG----
CCNNANCACGTGGTCN
 A C G T A C G T A G T C A T C G T G A C A G T C T G A C T A G C A G C T A C T G C G A T A C T G A C G T A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A