Information for 6-GAATTGATCC (Motif 9)

A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C
Reverse Opposite:
C T A G A C T G T C G A A C G T T G A C G T C A T G C A C A G T C G A T T G A C
p-value:1e-9
log p-value:-2.094e+01
Information Content per bp:1.685
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif346.1
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets39.5 +/- 25.1bp
Average Position of motif in Background52.3 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAATTGATCC------
NNANTTGACCCCTNNNN
 A C G T A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAATTGATCC-
---ATAATCCC
 A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAATTGATCC------
NNCNTGACCCCGCTCT
 A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAATTGATCC
NTATYGATCH
 A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAATTGATCC-----
NANANTTAATCCCNNNN
 A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAATTGATCC------
TGTCGTGACCCCTTAAT
 A C G T A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAATTGATCC----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAATTGATCC-----
GATAATTAATCCCTCTT
 A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAATTGATCC------
NNNNTGACCCGGCGCG
 A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAATTGATCC-----
NNNAATTAATCCCCNCN
 A C G T A C G T A C T G C G T A G T C A A C G T A C G T A C T G T G C A A G C T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T