Information for 7-TGAGAGVCATGTC (Motif 7)

A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
Reverse Opposite:
A T C G C G T A G T A C C G T A A C G T A C T G A G T C A G T C G A C T A G T C A C G T A G T C G T C A
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.1 +/- 17.6bp
Average Position of motif in Background40.9 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAGVCATGTC
CTTGAGTGGCT----
 A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGVCATGTC
NTGATTGACAGN--
 A C G T A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGVCATGTC
BTGABTGACAGS--
 A C G T A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGAGAGVCATGTC
----TGGAATGT-
 A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGAGAGVCATGTC
-------CATGAC
 A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAGAGVCATGTC
TTGAGTGSTT----
 A C G T A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGAGAGVCATGTC
TGAGTGACAGSC-
 A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGAGAGVCATGTC
---NTGGAATGTG
 A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGAGAGVCATGTC-
------NCGTGACN
 A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGAGAGVCATGTC
BTBRAGTGSN-----
 A C G T A C G T A C G T A C T G C G T A A C T G C T G A A C T G T A C G G T A C C G T A A C G T A C T G C G A T A T G C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T