Information for 3-GCGCGCCGCSCTCCGG (Motif 4)

A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
Reverse Opposite:
T G A C A G T C C T A G C T A G T C G A C T A G T A G C A C T G A T G C A T C G A C T G A G T C A T C G A G T C A C T G G T A C
p-value:1e-13
log p-value:-3.102e+01
Information Content per bp:1.760
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 20.4bp
Average Position of motif in Background53.9 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCGCSCTCCGG
AGCGCGCC---------
 A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGCCGCSCTCCGG
NCANGCGCGCGCGCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GCGCGCCGCSCTCCGG
ATAAAGGCGCGCGAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCGCGCCGCSCTCCGG
--GCTCCGCCCMCY--
 A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGCGCCGCSCTCCGG
ANCGCGCGCCCTTNN----
 A C G T A C G T A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGCGCCGCSCTCCGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCGCGCCGCSCTCCGG
---GGCCACRCCCMK-
 A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCGCGCCGCSCTCCGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGCGCCGCSCTCCGG
---GGCCCCGCCCCC-
 A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCCGCSCTCCGG
GCCGCGCAGTGCGT---
 A C G T A C T G G T A C C T A G A T G C A C T G A G T C A T G C T A C G A G T C A T C G G A T C A C G T A G T C G A T C A C T G A C T G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T