Information for 9-GGACACGTGTAGC (Motif 9)

A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A G T A C G T C A A G T C A C T G A C G T A C T G A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.4 +/- 32.4bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGACACGTGTAGC
-AACACGTGTT--
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGACACGTGTAGC
-GACACGTGCC--
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGACACGTGTAGC
-GCCACGTGT---
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGACACGTGTAGC
TAACGACACGTGC---
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGACACGTGTAGC
-GHCACGTG----
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGACACGTGTAGC
-GGCACGTGTC--
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGACACGTGTAGC
-GGCACGTGTC--
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGACACGTGTAGC
-GNCACGTG----
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGACACGTGTAGC
---CACGTGBN--
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGACACGTGTAGC
---CACGTG----
 A C T G A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T T G C A A C T G A G T C
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G A C G T A C G T A C G T A C G T