Information for 4-WSTRRCMRGWCTSWCC (Motif 7)

C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A T A C G C G T A A C T G C G A T A G T C A G C T A C G T C T A G A G C T A G C T C G T A A T C G C G T A
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 24.5bp
Average Position of motif in Background26.4 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:WSTRRCMRGWCTSWCC--
-------NNACTTACCTN
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:WSTRRCMRGWCTSWCC
-AGCAACAGCCGCACC
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C
A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:WSTRRCMRGWCTSWCC----
---TACGAGACTCCTCTAAC
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:WSTRRCMRGWCTSWCC
--TGACAGGTGTCA--
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C
A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:WSTRRCMRGWCTSWCC---
-------TGTCTGDCACCT
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--WSTRRCMRGWCTSWCC
GGATTGACAGGTCNTT--
 A C G T A C G T C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:WSTRRCMRGWCTSWCC------
--AAACYKGTTWDACMRGTTTB
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.49
Offset:11
Orientation:reverse strand
Alignment:WSTRRCMRGWCTSWCC-
-----------TGACCT
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.49
Offset:11
Orientation:reverse strand
Alignment:WSTRRCMRGWCTSWCC---
-----------TGACCTYA
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:WSTRRCMRGWCTSWCC---
------CTGTCTGTCACCT
 C G A T A T G C A C G T C T G A C T G A A G T C G T C A T C G A A C T G C G T A A G T C A C G T A T G C C G A T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T