Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-139 | -3.220e+02 | 0.0000 | 129.0 | 16.00% | 268.4 | 0.56% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-97 | -2.236e+02 | 0.0000 | 124.0 | 15.38% | 530.7 | 1.10% | motif file (matrix) |
svg |
3 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-39 | -9.124e+01 | 0.0000 | 240.0 | 29.78% | 5846.7 | 12.17% | motif file (matrix) |
svg |
4 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-38 | -8.849e+01 | 0.0000 | 122.0 | 15.14% | 1776.9 | 3.70% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-38 | -8.846e+01 | 0.0000 | 106.0 | 13.15% | 1340.8 | 2.79% | motif file (matrix) |
svg |
6 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-37 | -8.607e+01 | 0.0000 | 90.0 | 11.17% | 978.1 | 2.04% | motif file (matrix) |
svg |
7 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-35 | -8.244e+01 | 0.0000 | 109.0 | 13.52% | 1520.4 | 3.16% | motif file (matrix) |
svg |
8 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-32 | -7.516e+01 | 0.0000 | 98.0 | 12.16% | 1345.9 | 2.80% | motif file (matrix) |
svg |
9 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-31 | -7.145e+01 | 0.0000 | 110.0 | 13.65% | 1760.8 | 3.66% | motif file (matrix) |
svg |
10 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-30 | -7.022e+01 | 0.0000 | 186.0 | 23.08% | 4456.4 | 9.28% | motif file (matrix) |
svg |
11 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-25 | -5.909e+01 | 0.0000 | 52.0 | 6.45% | 458.6 | 0.95% | motif file (matrix) |
svg |
12 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-23 | -5.355e+01 | 0.0000 | 38.0 | 4.71% | 248.9 | 0.52% | motif file (matrix) |
svg |
13 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-20 | -4.723e+01 | 0.0000 | 81.0 | 10.05% | 1411.5 | 2.94% | motif file (matrix) |
svg |
14 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-20 | -4.696e+01 | 0.0000 | 69.0 | 8.56% | 1056.3 | 2.20% | motif file (matrix) |
svg |
15 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-18 | -4.211e+01 | 0.0000 | 103.0 | 12.78% | 2305.1 | 4.80% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-18 | -4.146e+01 | 0.0000 | 82.0 | 10.17% | 1591.9 | 3.31% | motif file (matrix) |
svg |
17 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-17 | -4.009e+01 | 0.0000 | 298.0 | 36.97% | 11240.3 | 23.39% | motif file (matrix) |
svg |
18 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-15 | -3.579e+01 | 0.0000 | 114.0 | 14.14% | 2966.3 | 6.17% | motif file (matrix) |
svg |
19 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-14 | -3.380e+01 | 0.0000 | 31.0 | 3.85% | 294.3 | 0.61% | motif file (matrix) |
svg |
20 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-14 | -3.349e+01 | 0.0000 | 61.0 | 7.57% | 1117.1 | 2.32% | motif file (matrix) |
svg |
21 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-14 | -3.237e+01 | 0.0000 | 60.0 | 7.44% | 1114.3 | 2.32% | motif file (matrix) |
svg |
22 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-12 | -2.839e+01 | 0.0000 | 73.0 | 9.06% | 1686.2 | 3.51% | motif file (matrix) |
svg |
23 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-11 | -2.702e+01 | 0.0000 | 39.0 | 4.84% | 598.0 | 1.24% | motif file (matrix) |
svg |
24 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-11 | -2.588e+01 | 0.0000 | 54.0 | 6.70% | 1096.9 | 2.28% | motif file (matrix) |
svg |
25 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-10 | -2.476e+01 | 0.0000 | 13.0 | 1.61% | 54.7 | 0.11% | motif file (matrix) |
svg |
26 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-10 | -2.459e+01 | 0.0000 | 30.0 | 3.72% | 396.2 | 0.82% | motif file (matrix) |
svg |
27 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-9 | -2.237e+01 | 0.0000 | 40.0 | 4.96% | 733.1 | 1.53% | motif file (matrix) |
svg |
28 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-8 | -2.038e+01 | 0.0000 | 23.0 | 2.85% | 285.6 | 0.59% | motif file (matrix) |
svg |
29 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-8 | -1.895e+01 | 0.0000 | 52.0 | 6.45% | 1260.7 | 2.62% | motif file (matrix) |
svg |
30 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-8 | -1.894e+01 | 0.0000 | 47.0 | 5.83% | 1076.5 | 2.24% | motif file (matrix) |
svg |
31 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.885e+01 | 0.0000 | 52.0 | 6.45% | 1264.1 | 2.63% | motif file (matrix) |
svg |
32 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-7 | -1.710e+01 | 0.0000 | 15.0 | 1.86% | 143.4 | 0.30% | motif file (matrix) |
svg |
33 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.499e+01 | 0.0000 | 44.0 | 5.46% | 1117.2 | 2.33% | motif file (matrix) |
svg |
34 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-5 | -1.357e+01 | 0.0000 | 41.0 | 5.09% | 1062.7 | 2.21% | motif file (matrix) |
svg |
35 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-5 | -1.319e+01 | 0.0000 | 35.0 | 4.34% | 849.8 | 1.77% | motif file (matrix) |
svg |
36 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-5 | -1.311e+01 | 0.0000 | 41.0 | 5.09% | 1082.8 | 2.25% | motif file (matrix) |
svg |
37 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-5 | -1.292e+01 | 0.0000 | 33.0 | 4.09% | 785.1 | 1.63% | motif file (matrix) |
svg |
38 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.242e+01 | 0.0000 | 48.0 | 5.96% | 1399.2 | 2.91% | motif file (matrix) |
svg |
39 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.228e+01 | 0.0000 | 73.0 | 9.06% | 2501.7 | 5.21% | motif file (matrix) |
svg |
40 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.214e+01 | 0.0000 | 108.0 | 13.40% | 4169.8 | 8.68% | motif file (matrix) |
svg |
41 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-5 | -1.155e+01 | 0.0001 | 21.0 | 2.61% | 410.0 | 0.85% | motif file (matrix) |
svg |
42 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.036e+01 | 0.0003 | 60.0 | 7.44% | 2051.4 | 4.27% | motif file (matrix) |
svg |
43 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.024e+01 | 0.0003 | 31.0 | 3.85% | 819.5 | 1.71% | motif file (matrix) |
svg |
44 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.014e+01 | 0.0003 | 89.0 | 11.04% | 3437.7 | 7.16% | motif file (matrix) |
svg |
45 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.707e+00 | 0.0005 | 63.0 | 7.82% | 2239.8 | 4.66% | motif file (matrix) |
svg |
46 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.423e+00 | 0.0006 | 47.0 | 5.83% | 1535.4 | 3.20% | motif file (matrix) |
svg |
47 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-3 | -9.167e+00 | 0.0008 | 9.0 | 1.12% | 107.0 | 0.22% | motif file (matrix) |
svg |
48 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -8.982e+00 | 0.0010 | 47.0 | 5.83% | 1565.2 | 3.26% | motif file (matrix) |
svg |
49 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-3 | -8.809e+00 | 0.0011 | 38.0 | 4.71% | 1183.0 | 2.46% | motif file (matrix) |
svg |
50 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-3 | -8.517e+00 | 0.0015 | 19.0 | 2.36% | 435.8 | 0.91% | motif file (matrix) |
svg |
51 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.388e+00 | 0.0016 | 38.0 | 4.71% | 1208.2 | 2.51% | motif file (matrix) |
svg |
52 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -8.381e+00 | 0.0016 | 42.0 | 5.21% | 1384.2 | 2.88% | motif file (matrix) |
svg |
53 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.315e+00 | 0.0017 | 15.0 | 1.86% | 303.0 | 0.63% | motif file (matrix) |
svg |
54 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -8.199e+00 | 0.0019 | 27.0 | 3.35% | 756.5 | 1.57% | motif file (matrix) |
svg |
55 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.076e+00 | 0.0021 | 42.0 | 5.21% | 1405.9 | 2.93% | motif file (matrix) |
svg |
56 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.031e+00 | 0.0021 | 9.0 | 1.12% | 125.7 | 0.26% | motif file (matrix) |
svg |
57 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.007e+00 | 0.0021 | 47.0 | 5.83% | 1636.8 | 3.41% | motif file (matrix) |
svg |
58 |
| THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer | 1e-3 | -7.998e+00 | 0.0021 | 32.0 | 3.97% | 974.1 | 2.03% | motif file (matrix) |
svg |
59 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.870e+00 | 0.0024 | 7.0 | 0.87% | 77.4 | 0.16% | motif file (matrix) |
svg |
60 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.673e+00 | 0.0028 | 6.0 | 0.74% | 57.1 | 0.12% | motif file (matrix) |
svg |
61 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.500e+00 | 0.0033 | 30.0 | 3.72% | 918.7 | 1.91% | motif file (matrix) |
svg |
62 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.466e+00 | 0.0034 | 17.0 | 2.11% | 400.7 | 0.83% | motif file (matrix) |
svg |
63 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -7.323e+00 | 0.0038 | 21.0 | 2.61% | 558.1 | 1.16% | motif file (matrix) |
svg |
64 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.088e+00 | 0.0048 | 73.0 | 9.06% | 2968.4 | 6.18% | motif file (matrix) |
svg |
65 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.088e+00 | 0.0048 | 18.0 | 2.23% | 452.2 | 0.94% | motif file (matrix) |
svg |
66 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -6.943e+00 | 0.0053 | 39.0 | 4.84% | 1353.0 | 2.82% | motif file (matrix) |
svg |
67 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.716e+00 | 0.0066 | 22.0 | 2.73% | 627.2 | 1.31% | motif file (matrix) |
svg |
68 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.603e+00 | 0.0073 | 27.0 | 3.35% | 843.0 | 1.75% | motif file (matrix) |
svg |
69 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.570e+00 | 0.0074 | 59.0 | 7.32% | 2333.8 | 4.86% | motif file (matrix) |
svg |
70 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.481e+00 | 0.0080 | 7.0 | 0.87% | 98.6 | 0.21% | motif file (matrix) |
svg |
71 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -6.392e+00 | 0.0086 | 176.0 | 21.84% | 8519.2 | 17.73% | motif file (matrix) |
svg |
72 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.376e+00 | 0.0086 | 42.0 | 5.21% | 1536.8 | 3.20% | motif file (matrix) |
svg |
73 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -6.324e+00 | 0.0089 | 32.0 | 3.97% | 1081.9 | 2.25% | motif file (matrix) |
svg |
74 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.258e+00 | 0.0094 | 81.0 | 10.05% | 3472.1 | 7.23% | motif file (matrix) |
svg |
75 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -6.106e+00 | 0.0108 | 33.0 | 4.09% | 1142.2 | 2.38% | motif file (matrix) |
svg |
76 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -6.068e+00 | 0.0111 | 8.0 | 0.99% | 135.1 | 0.28% | motif file (matrix) |
svg |
77 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.059e+00 | 0.0111 | 70.0 | 8.68% | 2938.6 | 6.12% | motif file (matrix) |
svg |
78 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.968e+00 | 0.0119 | 91.0 | 11.29% | 4028.1 | 8.38% | motif file (matrix) |
svg |
79 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.907e+00 | 0.0125 | 33.0 | 4.09% | 1157.3 | 2.41% | motif file (matrix) |
svg |
80 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -5.661e+00 | 0.0158 | 5.0 | 0.62% | 59.2 | 0.12% | motif file (matrix) |
svg |
81 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.576e+00 | 0.0170 | 44.0 | 5.46% | 1704.1 | 3.55% | motif file (matrix) |
svg |
82 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.555e+00 | 0.0172 | 75.0 | 9.31% | 3258.5 | 6.78% | motif file (matrix) |
svg |
83 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.532e+00 | 0.0174 | 29.0 | 3.60% | 1004.0 | 2.09% | motif file (matrix) |
svg |
84 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.333e+00 | 0.0209 | 27.0 | 3.35% | 927.3 | 1.93% | motif file (matrix) |
svg |
85 |
| E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-2 | -5.331e+00 | 0.0209 | 7.0 | 0.87% | 121.9 | 0.25% | motif file (matrix) |
svg |
86 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -4.969e+00 | 0.0294 | 82.0 | 10.17% | 3707.9 | 7.72% | motif file (matrix) |
svg |
87 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.966e+00 | 0.0294 | 24.0 | 2.98% | 818.4 | 1.70% | motif file (matrix) |
svg |
88 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -4.886e+00 | 0.0312 | 14.0 | 1.74% | 392.8 | 0.82% | motif file (matrix) |
svg |
89 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -4.823e+00 | 0.0329 | 3.0 | 0.37% | 24.8 | 0.05% | motif file (matrix) |
svg |
90 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.722e+00 | 0.0360 | 36.0 | 4.47% | 1401.9 | 2.92% | motif file (matrix) |
svg |
91 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.691e+00 | 0.0367 | 8.0 | 0.99% | 171.1 | 0.36% | motif file (matrix) |
svg |
92 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.689e+00 | 0.0367 | 29.0 | 3.60% | 1070.2 | 2.23% | motif file (matrix) |
svg |
93 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.613e+00 | 0.0388 | 34.0 | 4.22% | 1315.3 | 2.74% | motif file (matrix) |
svg |