Information for 6-AGTAAATGGTTAA (Motif 5)

C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T C G T A G C T A T A G C A G T C C G T A C A G T A G C T C G A T C T G A A G T C G A C T
p-value:1e-17
log p-value:-3.978e+01
Information Content per bp:1.783
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 26.3bp
Average Position of motif in Background48.8 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGTAAATGGTTAA-
-GTTAATGATTAAC
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGTAAATGGTTAA--
NGTTAATNATTAACN
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGTAAATGGTTAA
-GTTAATNATTAA
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGTAAATGGTTAA--
--TTAATGTTTAACC
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A A C G T A C G T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTAAATGGTTAA
--TAATTGATTA-
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTAAATGGTTAA-
--TGATTGGCTANN
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGTAAATGGTTAA
-----ATGTTTAC
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTAAATGGTTAA
GCTAAACGGT---
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTAAATGGTTAA------
--NNNTTAGTTAACTNANN
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTAAATGGTTAA-
---TATTGTTTATT
 C G T A A C T G A G C T C G T A C T G A G C T A C G A T A C T G A T C G C A G T A C G T C G T A G T C A A C G T
A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T