Information for 17-CCTGAGCTCAGGC (Motif 26)

A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
Reverse Opposite:
A T C G A T G C T A G C C G A T A T C G T C G A A T C G A T G C C A G T T A G C C T G A A C T G A T C G
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.673
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.21%
Number of Background Sequences with motif652.6
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets48.5 +/- 28.0bp
Average Position of motif in Background49.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGAGCTCAGGC
-CGGAGC------
 A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCTGAGCTCAGGC--
-----GCTCGGSCTC
 A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTGAGCTCAGGC
-CAAAGGTCAG--
 A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTGAGCTCAGGC
---CAGCC-----
 A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTGAGCTCAGGC
GCCTCAGGGCAT--
 A C G T A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTGAGCTCAGGC
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCTGAGCTCAGGC
SCCTSAGGSCAW--
 A C G T A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAGCTCAGGC--
NNNNTGAGCACTGTNNG
 A C G T A C G T A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCTGAGCTCAGGC
WDNCTGGGCA-----
 A C G T A C G T A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTGAGCTCAGGC
--TGACCTYA---
 A T G C T G A C G A C T A T C G G T C A T A C G A T G C A G C T A T G C G C T A A T C G A T C G A T G C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T