Information for 10-CCATGAGGCTCCC (Motif 19)

A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G A G T C A G T C A C G T A G T C C T G A A G C T A C T G A T C G
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 21.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:7
Orientation:forward strand
Alignment:CCATGAGGCTCCC
-------GCTCCG
 A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCATGAGGCTCCC-----
-TACGAGACTCCTCTAAC
 A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCATGAGGCTCCC
ATGCCCTGAGGC----
 A C G T A C G T A C G T A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCATGAGGCTCCC
NGCCTGAGGCN---
 A C G T A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCATGAGGCTCCC
TGCCTGAGGCN---
 A C G T A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCATGAGGCTCCC
WTGSCCTSAGGS----
 A C G T A C G T A C G T A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCATGAGGCTCCC
NGCCTNAGGCN---
 A C G T A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCATGAGGCTCCC----
-NNNGGGGCGCCCCCNN
 A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCATGAGGCTCCC
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCATGAGGCTCCC
------NGCTN--
 A T G C A G T C C T G A A G C T A C T G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T