Information for 5-CTCCACAGGGAGG (Motif 9)

G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G
Reverse Opposite:
A G T C T A G C A C G T A G T C A G T C T G A C A G C T A T C G C A G T A C T G A C T G C G T A C T A G
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.631
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif5.80%
Number of Background Sequences with motif748.9
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets56.7 +/- 25.6bp
Average Position of motif in Background51.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTCCACAGGGAGG
NGTCCCNNGGGA--
 A C G T G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCCACAGGGAGG-
CACCCCCGGGGGGG
 G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAGGGAGG-
ACCCCCCCGGGGGGN
 A C G T G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAGGGAGG-
NCCCCCCCGGGGGGN
 A C G T G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCCACAGGGAGG
CACAGCAGGGGG-
 G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCCACAGGGAGG-
NCNCAGCGGGGGGTC
 A C G T G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCCACAGGGAGG
-TCCCCTGGGGAC
 G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTCCACAGGGAGG----
-------GGGAGGACNG
 G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTCCACAGGGAGG---
------GGGGNGGGGC
 G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCACAGGGAGG
ATTCCCAAGGGAAT
 A C G T G A T C G A C T T A G C T G A C G T C A T A G C T C G A A C T G T C A G T C A G T G C A A T C G T C A G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T