Information for 11-GGTAATGAAG (Motif 38)

A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A G T C
p-value:1e-5
log p-value:-1.214e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.3 +/- 27.8bp
Average Position of motif in Background44.9 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGTAATGAAG
GKTAATGR--
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGTAATGAAG
AGTAATTAAC
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGTAATGAAG
GNTAATTANN
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGTAATGAAG---
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

EVX1/MA0887.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTAATGAAG
GNTAATTANN
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTAATGAAG---
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTAATGAAG
NNTAATTANN
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGTAATGAAG
TGGAGGTAATTAAC
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTAATGAAG
NNTAATTAGN
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

MNX1/MA0707.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTAATGAAG
GGTAATTAAA
 A C T G A C T G A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A