Information for 22-TGAATGCATAAACATC (Motif 33)

C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
Reverse Opposite:
C A T G C T G A C G A T C T A G G A C T A C G T A C G T C G T A A C G T T A C G A T G C G T C A A C G T A C G T T A G C C G T A
p-value:1e-7
log p-value:-1.834e+01
Information Content per bp:1.737
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.0 +/- 20.1bp
Average Position of motif in Background42.2 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGAATGCATAAACATC--
---ATGAATATTCATGAG
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TGAATGCATAAACATC
---WWATRTAAACAN-
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGAATGCATAAACATC
---ATGMATATDC---
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.64
Offset:7
Orientation:forward strand
Alignment:TGAATGCATAAACATC
-------GTAAACA--
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGAATGCATAAACATC-
--YATGCATATRCATRT
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C A C G T
A C G T A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TGAATGCATAAACATC
-------GTAAACAA-
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGAATGCATAAACATC
---ATGAATATTC---
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TGAATGCATAAACATC
-------GTAAACAA-
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TGAATGCATAAACATC
-------GTAAACA--
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGAATGCATAAACATC-
------AATAAACAATN
 C G A T A T C G G T C A C G T A A C G T A T C G A T G C C G T A C G A T G T C A C G T A C G T A A G T C C G T A A G C T G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A