Information for 13-TGGCGAAAATGCA (Motif 30)

A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T G T A C A C T G A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 11.8bp
Average Position of motif in Background36.1 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGCGAAAATGCA---
-GAAAAAATTGCAAGG
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGGCGAAAATGCA
ARGAGGMCAAAATGW-
 A C G T A C G T A C G T A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGCGAAAATGCA-
----GHATATKCAT
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGGCGAAAATGCA---
----GAAAGTGAAAGT
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGGCGAAAATGCA------
------ATATGCAAATNNN
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGCGAAAATGCA-
----GAATATTCAT
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGGCGAAAATGCA---
------ATATGCAAAT
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGGCGAAAATGCA---
--ACGAAAGCGAAAGT
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGGCGAAAATGCA---
----GAAACTGAAACT
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGCGAAAATGCA----
-GGCAAAAGTCCAATAA
 A C G T A C T G A C T G T A G C A C T G C G T A C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T