Information for 12-GCTAGATCAAGGCACA (Motif 14)

A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A T G C A G T C C G A T A C G T A C T G C G T A A C G T A G T C A C G T C T G A A C T G G T A C
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.2 +/- 21.0bp
Average Position of motif in Background75.0 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTAGATCAAGGCACA-
NNNAGATCAAAGGANNN
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA-
TATAGATCAAAGGAAAA
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA-
TATAGATCAAAGGAAAA
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTAGATCAAGGCACA-
NANAGATCAAAGGGNNN
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA-
-------CCAGGAACAG
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA
---ACATCAAAGGNA-
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA-------
-------CGAAGCACACAAAATA
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA
---ACATCAAAGG---
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA
---CNGTCACGCCAC-
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A
A C G T A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTAGATCAAGGCACA
-AAAGATCAAAGGGTT
 A C T G G T A C A G C T C G T A A C T G C G T A A C G T T A G C C G T A C G T A C T A G A T C G A G T C C G T A A G T C C G T A
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T