Information for 11-TTRYYTTTWTTGCTGW (Motif 13)

A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A T C A G G T A C G C T A C T G A C G A T C T G A G T C A T C G A C T G A T C G A A G T C C T G A T C G A
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.662
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif248.9
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets48.4 +/- 19.9bp
Average Position of motif in Background47.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW-
---TTTTTTTTCNNGTN
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW
----TTTTATGGCTN-
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW
---NTTTTATTACN--
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW-----
------AAANTGCTGACTNAG
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW
----TTTTATTGC---
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW
---TTTTTATTGC---
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW
---TTTTTATTGG---
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTRYYTTTWTTGCTGW
---NTTTTATGAC---
 A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTRYYTTTWTTGCTGW--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTRYYTTTWTTGCTGW--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A G C T G A C T T C A G A G C T G A C T A G C T A C G T G A C T G C T A A G C T C A G T C A T G A G T C C G A T A C T G C G T A A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T