Information for 13-CYGSACWMARAAT (Motif 11)

A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T
Reverse Opposite:
C G T A A C G T C G A T A G T C A C G T A C G T C G A T A C T G A C G T A T G C A G T C C T G A A C T G
p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.828
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.0 +/- 26.7bp
Average Position of motif in Background27.0 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CYGSACWMARAAT-
CGAAGCACACAAAATA
 A C G T A C G T A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CYGSACWMARAAT-
AAACAGACAAAGGAAT
 A C G T A C G T A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CYGSACWMARAAT
-GGAACAAAGR--
 A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CYGSACWMARAAT--
-----CCAAAAATAG
 A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CYGSACWMARAAT---
----ACTATAAATAGA
 A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CYGSACWMARAAT--
AGAAGAACAAAGGACTA
 A C G T A C G T A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CYGSACWMARAAT---
----GCTATAAATAGC
 A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CYGSACWMARAAT----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CYGSACWMARAAT--
ATAAGAACAAAGGACTA
 A C G T A C G T A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CYGSACWMARAAT
------NAACAAT
 A G T C A G C T A C T G A T C G G T C A A G T C C G T A G T C A C G T A C T A G C G T A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T