Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-139 | -3.216e+02 | 0.0000 | 198.0 | 24.29% | 171.6 | 2.20% | motif file (matrix) |
svg |
2 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-69 | -1.610e+02 | 0.0000 | 289.0 | 35.46% | 904.1 | 11.59% | motif file (matrix) |
svg |
3 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-50 | -1.165e+02 | 0.0000 | 159.0 | 19.51% | 373.2 | 4.78% | motif file (matrix) |
svg |
4 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-49 | -1.148e+02 | 0.0000 | 170.0 | 20.86% | 431.9 | 5.54% | motif file (matrix) |
svg |
5 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-34 | -7.938e+01 | 0.0000 | 47.0 | 5.77% | 36.9 | 0.47% | motif file (matrix) |
svg |
6 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-34 | -7.923e+01 | 0.0000 | 46.0 | 5.64% | 34.7 | 0.45% | motif file (matrix) |
svg |
7 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-27 | -6.275e+01 | 0.0000 | 172.0 | 21.10% | 671.2 | 8.60% | motif file (matrix) |
svg |
8 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-24 | -5.728e+01 | 0.0000 | 50.0 | 6.13% | 71.0 | 0.91% | motif file (matrix) |
svg |
9 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-20 | -4.816e+01 | 0.0000 | 83.0 | 10.18% | 233.0 | 2.99% | motif file (matrix) |
svg |
10 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-20 | -4.799e+01 | 0.0000 | 103.0 | 12.64% | 340.8 | 4.37% | motif file (matrix) |
svg |
11 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-20 | -4.767e+01 | 0.0000 | 90.0 | 11.04% | 271.1 | 3.47% | motif file (matrix) |
svg |
12 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-18 | -4.323e+01 | 0.0000 | 83.0 | 10.18% | 253.1 | 3.24% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-18 | -4.208e+01 | 0.0000 | 42.0 | 5.15% | 70.6 | 0.90% | motif file (matrix) |
svg |
14 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-17 | -4.087e+01 | 0.0000 | 79.0 | 9.69% | 242.9 | 3.11% | motif file (matrix) |
svg |
15 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-17 | -4.005e+01 | 0.0000 | 300.0 | 36.81% | 1820.1 | 23.33% | motif file (matrix) |
svg |
16 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-15 | -3.561e+01 | 0.0000 | 37.0 | 4.54% | 65.8 | 0.84% | motif file (matrix) |
svg |
17 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-14 | -3.287e+01 | 0.0000 | 33.0 | 4.05% | 56.7 | 0.73% | motif file (matrix) |
svg |
18 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-13 | -3.189e+01 | 0.0000 | 64.0 | 7.85% | 202.5 | 2.60% | motif file (matrix) |
svg |
19 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-12 | -2.847e+01 | 0.0000 | 79.0 | 9.69% | 306.5 | 3.93% | motif file (matrix) |
svg |
20 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-11 | -2.736e+01 | 0.0000 | 47.0 | 5.77% | 133.3 | 1.71% | motif file (matrix) |
svg |
21 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-11 | -2.649e+01 | 0.0000 | 70.0 | 8.59% | 264.7 | 3.39% | motif file (matrix) |
svg |
22 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-10 | -2.516e+01 | 0.0000 | 53.0 | 6.50% | 174.4 | 2.24% | motif file (matrix) |
svg |
23 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-10 | -2.498e+01 | 0.0000 | 51.0 | 6.26% | 164.8 | 2.11% | motif file (matrix) |
svg |
24 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-10 | -2.495e+01 | 0.0000 | 23.0 | 2.82% | 36.1 | 0.46% | motif file (matrix) |
svg |
25 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-10 | -2.435e+01 | 0.0000 | 66.0 | 8.10% | 253.2 | 3.25% | motif file (matrix) |
svg |
26 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-10 | -2.383e+01 | 0.0000 | 52.0 | 6.38% | 176.0 | 2.26% | motif file (matrix) |
svg |
27 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-9 | -2.254e+01 | 0.0000 | 51.0 | 6.26% | 176.1 | 2.26% | motif file (matrix) |
svg |
28 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-8 | -2.045e+01 | 0.0000 | 30.0 | 3.68% | 76.0 | 0.97% | motif file (matrix) |
svg |
29 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-8 | -1.949e+01 | 0.0000 | 51.0 | 6.26% | 193.7 | 2.48% | motif file (matrix) |
svg |
30 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-7 | -1.662e+01 | 0.0000 | 10.0 | 1.23% | 9.8 | 0.13% | motif file (matrix) |
svg |
31 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.508e+01 | 0.0000 | 49.0 | 6.01% | 210.3 | 2.70% | motif file (matrix) |
svg |
32 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-6 | -1.440e+01 | 0.0000 | 42.0 | 5.15% | 171.1 | 2.19% | motif file (matrix) |
svg |
33 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-5 | -1.213e+01 | 0.0001 | 33.0 | 4.05% | 131.1 | 1.68% | motif file (matrix) |
svg |
34 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-5 | -1.213e+01 | 0.0001 | 13.0 | 1.60% | 26.4 | 0.34% | motif file (matrix) |
svg |
35 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-5 | -1.182e+01 | 0.0001 | 104.0 | 12.76% | 643.9 | 8.25% | motif file (matrix) |
svg |
36 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-5 | -1.171e+01 | 0.0001 | 79.0 | 9.69% | 453.5 | 5.81% | motif file (matrix) |
svg |
37 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-4 | -1.142e+01 | 0.0001 | 99.0 | 12.15% | 610.5 | 7.82% | motif file (matrix) |
svg |
38 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-4 | -1.063e+01 | 0.0002 | 50.0 | 6.13% | 255.6 | 3.28% | motif file (matrix) |
svg |
39 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -1.032e+01 | 0.0003 | 34.0 | 4.17% | 150.1 | 1.92% | motif file (matrix) |
svg |
40 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-4 | -9.880e+00 | 0.0005 | 33.0 | 4.05% | 147.2 | 1.89% | motif file (matrix) |
svg |
41 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -9.024e+00 | 0.0011 | 33.0 | 4.05% | 154.0 | 1.97% | motif file (matrix) |
svg |
42 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.985e+00 | 0.0011 | 34.0 | 4.17% | 161.8 | 2.07% | motif file (matrix) |
svg |
43 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -8.974e+00 | 0.0011 | 50.0 | 6.13% | 273.2 | 3.50% | motif file (matrix) |
svg |
44 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -8.908e+00 | 0.0011 | 33.0 | 4.05% | 155.1 | 1.99% | motif file (matrix) |
svg |
45 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.828e+00 | 0.0012 | 54.0 | 6.63% | 304.5 | 3.90% | motif file (matrix) |
svg |
46 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -8.256e+00 | 0.0021 | 103.0 | 12.64% | 697.4 | 8.94% | motif file (matrix) |
svg |
47 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-3 | -8.231e+00 | 0.0021 | 100.0 | 12.27% | 673.3 | 8.63% | motif file (matrix) |
svg |
48 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.189e+00 | 0.0021 | 23.0 | 2.82% | 97.0 | 1.24% | motif file (matrix) |
svg |
49 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -8.139e+00 | 0.0022 | 58.0 | 7.12% | 343.2 | 4.40% | motif file (matrix) |
svg |
50 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -7.952e+00 | 0.0026 | 24.0 | 2.94% | 104.2 | 1.34% | motif file (matrix) |
svg |
51 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.928e+00 | 0.0026 | 100.0 | 12.27% | 679.8 | 8.71% | motif file (matrix) |
svg |
52 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.816e+00 | 0.0028 | 19.0 | 2.33% | 74.3 | 0.95% | motif file (matrix) |
svg |
53 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -7.800e+00 | 0.0028 | 35.0 | 4.29% | 179.7 | 2.30% | motif file (matrix) |
svg |
54 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.684e+00 | 0.0031 | 52.0 | 6.38% | 304.1 | 3.90% | motif file (matrix) |
svg |
55 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.599e+00 | 0.0033 | 28.0 | 3.44% | 133.4 | 1.71% | motif file (matrix) |
svg |
56 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -7.473e+00 | 0.0037 | 60.0 | 7.36% | 368.8 | 4.73% | motif file (matrix) |
svg |
57 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-3 | -7.041e+00 | 0.0056 | 11.0 | 1.35% | 33.8 | 0.43% | motif file (matrix) |
svg |
58 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -6.926e+00 | 0.0062 | 22.0 | 2.70% | 99.3 | 1.27% | motif file (matrix) |
svg |
59 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -6.911e+00 | 0.0062 | 43.0 | 5.28% | 247.7 | 3.18% | motif file (matrix) |
svg |
60 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.884e+00 | 0.0062 | 36.0 | 4.42% | 196.5 | 2.52% | motif file (matrix) |
svg |
61 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.636e+00 | 0.0078 | 31.0 | 3.80% | 163.4 | 2.09% | motif file (matrix) |
svg |
62 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.518e+00 | 0.0087 | 38.0 | 4.66% | 215.3 | 2.76% | motif file (matrix) |
svg |
63 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -6.368e+00 | 0.0099 | 14.0 | 1.72% | 53.6 | 0.69% | motif file (matrix) |
svg |
64 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.140e+00 | 0.0123 | 27.0 | 3.31% | 140.8 | 1.80% | motif file (matrix) |
svg |
65 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-2 | -6.128e+00 | 0.0123 | 38.0 | 4.66% | 220.3 | 2.82% | motif file (matrix) |
svg |
66 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-2 | -5.983e+00 | 0.0139 | 17.0 | 2.09% | 74.1 | 0.95% | motif file (matrix) |
svg |
67 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.882e+00 | 0.0152 | 41.0 | 5.03% | 246.3 | 3.16% | motif file (matrix) |
svg |
68 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.649e+00 | 0.0188 | 23.0 | 2.82% | 118.0 | 1.51% | motif file (matrix) |
svg |
69 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.552e+00 | 0.0205 | 110.0 | 13.50% | 818.7 | 10.49% | motif file (matrix) |
svg |
70 |
| ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.545e+00 | 0.0205 | 6.0 | 0.74% | 14.6 | 0.19% | motif file (matrix) |
svg |
71 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-2 | -5.431e+00 | 0.0225 | 31.0 | 3.80% | 177.8 | 2.28% | motif file (matrix) |
svg |
72 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.990e+00 | 0.0344 | 17.0 | 2.09% | 83.0 | 1.06% | motif file (matrix) |
svg |
73 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.975e+00 | 0.0345 | 29.0 | 3.56% | 168.9 | 2.17% | motif file (matrix) |
svg |
74 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -4.882e+00 | 0.0373 | 10.0 | 1.23% | 38.4 | 0.49% | motif file (matrix) |
svg |
75 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -4.782e+00 | 0.0407 | 22.0 | 2.70% | 119.7 | 1.53% | motif file (matrix) |
svg |
76 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.758e+00 | 0.0411 | 20.0 | 2.45% | 105.5 | 1.35% | motif file (matrix) |
svg |
77 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -4.717e+00 | 0.0423 | 26.0 | 3.19% | 149.6 | 1.92% | motif file (matrix) |
svg |
78 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.715e+00 | 0.0423 | 45.0 | 5.52% | 296.3 | 3.80% | motif file (matrix) |
svg |