Information for 4-AAGGTCAGAA (Motif 5)

C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
Reverse Opposite:
C A G T A C G T A G T C C G A T A C T G G T C A A G T C A G T C A C G T C G A T
p-value:1e-22
log p-value:-5.087e+01
Information Content per bp:1.844
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets53.8 +/- 24.3bp
Average Position of motif in Background50.8 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCAGAA
TCAAGGTCAN--
 A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAGAA
CAAAGGTCAG--
 A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAGAA
TCAAGGTCAT--
 A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAGGTCAGAA
AAGGTCAC--
 C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAGGTCAGAA
ATCAAGGTCA---
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCAGAA
TRAGGTCA---
 A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGTCAGAA
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAGAA-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AAGGTCAGAA
-AGGTCA---
 C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---AAGGTCAGAA
BTCAAGGTCA---
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A G T C C G T A C T A G T C G A G C T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T