Information for 20-CGATTAAAAACAG (Motif 27)

A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G
Reverse Opposite:
A G T C A C G T A T C G A C G T A C G T A C G T A G C T A C G T C T G A C G T A C G A T G A T C C T A G
p-value:1e-8
log p-value:-2.024e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 24.8bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGATTAAAAACAG
CCGTATTATAAACAA
 A C G T A C G T A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGATTAAAAACAG
--ATTAAA-----
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGATTAAAAACAG
-NATTCAAAT---
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGATTAAAAACAG--
ATGCTAAAAATAGAA
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGATTAAAAACAG-
--DCYAAAAATAGM
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G A C G T
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGATTAAAAACAG-
--WWTRTAAACAVG
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G A C G T
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxo1/MA0480.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGATTAAAAACAG--
----TGTAAACAGGA
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

Hoxd9/MA0913.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGATTAAAAACAG
GCAATAAAAA----
 A C G T A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGATTAAAAACAG-
--ACTATAAATAGA
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G A C G T
A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGATTAAAAACAG-
AAATAAGAAAAAAC
 A G T C C A T G C G T A A C G T A G C T G T C A C T G A C G T A C G T A C G T A A T G C C G T A C T A G A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C