Information for 11-GCGCCCTCTG (Motif 16)

A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G
Reverse Opposite:
G T A C T G C A T C A G T C G A A C T G T A C G A T C G A T G C C T A G T A G C
p-value:1e-12
log p-value:-2.853e+01
Information Content per bp:1.654
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.61%
Number of Background Sequences with motif207.9
Percentage of Background Sequences with motif2.66%
Average Position of motif in Targets49.2 +/- 26.9bp
Average Position of motif in Background46.9 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GCGCCCTCTG-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCCTCTG-------
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCGCCCTCTG--
--GCCATCTGTT
 A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCGCCCTCTG---
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTG
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCGCCCTCTG-------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGCCCTCTG---
-CGCCCCCTGACA
 A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T A C G T
A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCCTCTG
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCCTCTG
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGCCCTCTG--
--ACCATCTGTT
 A T C G G A T C T A C G T A G C A T G C T G A C A G C T A G T C A C G T C A T G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T