Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-130 | -3.008e+02 | 0.0000 | 189.0 | 23.33% | 1040.2 | 2.17% | motif file (matrix) |
svg |
2 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-62 | -1.438e+02 | 0.0000 | 277.0 | 34.20% | 5598.4 | 11.69% | motif file (matrix) |
svg |
3 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-39 | -9.207e+01 | 0.0000 | 156.0 | 19.26% | 2716.5 | 5.67% | motif file (matrix) |
svg |
4 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-36 | -8.477e+01 | 0.0000 | 134.0 | 16.54% | 2189.2 | 4.57% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-31 | -7.254e+01 | 0.0000 | 106.0 | 13.09% | 1606.9 | 3.35% | motif file (matrix) |
svg |
6 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-31 | -7.204e+01 | 0.0000 | 112.0 | 13.83% | 1793.6 | 3.74% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-30 | -7.086e+01 | 0.0000 | 121.0 | 14.94% | 2096.5 | 4.38% | motif file (matrix) |
svg |
8 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-29 | -6.860e+01 | 0.0000 | 100.0 | 12.35% | 1510.8 | 3.15% | motif file (matrix) |
svg |
9 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-27 | -6.378e+01 | 0.0000 | 42.0 | 5.19% | 240.0 | 0.50% | motif file (matrix) |
svg |
10 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-25 | -5.972e+01 | 0.0000 | 56.0 | 6.91% | 530.1 | 1.11% | motif file (matrix) |
svg |
11 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-23 | -5.368e+01 | 0.0000 | 41.0 | 5.06% | 296.4 | 0.62% | motif file (matrix) |
svg |
12 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-22 | -5.155e+01 | 0.0000 | 49.0 | 6.05% | 473.6 | 0.99% | motif file (matrix) |
svg |
13 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-20 | -4.673e+01 | 0.0000 | 34.0 | 4.20% | 230.7 | 0.48% | motif file (matrix) |
svg |
14 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-19 | -4.586e+01 | 0.0000 | 300.0 | 37.04% | 10819.9 | 22.59% | motif file (matrix) |
svg |
15 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-19 | -4.482e+01 | 0.0000 | 98.0 | 12.10% | 2023.4 | 4.22% | motif file (matrix) |
svg |
16 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.674e+01 | 0.0000 | 71.0 | 8.77% | 1345.3 | 2.81% | motif file (matrix) |
svg |
17 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-15 | -3.552e+01 | 0.0000 | 143.0 | 17.65% | 4145.0 | 8.65% | motif file (matrix) |
svg |
18 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-13 | -3.200e+01 | 0.0000 | 65.0 | 8.02% | 1278.2 | 2.67% | motif file (matrix) |
svg |
19 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-13 | -3.066e+01 | 0.0000 | 49.0 | 6.05% | 806.5 | 1.68% | motif file (matrix) |
svg |
20 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-11 | -2.681e+01 | 0.0000 | 61.0 | 7.53% | 1298.1 | 2.71% | motif file (matrix) |
svg |
21 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-11 | -2.645e+01 | 0.0000 | 60.0 | 7.41% | 1275.3 | 2.66% | motif file (matrix) |
svg |
22 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-11 | -2.609e+01 | 0.0000 | 75.0 | 9.26% | 1833.2 | 3.83% | motif file (matrix) |
svg |
23 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-10 | -2.345e+01 | 0.0000 | 31.0 | 3.83% | 439.4 | 0.92% | motif file (matrix) |
svg |
24 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-10 | -2.321e+01 | 0.0000 | 66.0 | 8.15% | 1607.3 | 3.36% | motif file (matrix) |
svg |
25 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-9 | -2.152e+01 | 0.0000 | 54.0 | 6.67% | 1228.0 | 2.56% | motif file (matrix) |
svg |
26 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-8 | -1.894e+01 | 0.0000 | 20.0 | 2.47% | 231.3 | 0.48% | motif file (matrix) |
svg |
27 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-8 | -1.855e+01 | 0.0000 | 51.0 | 6.30% | 1228.3 | 2.56% | motif file (matrix) |
svg |
28 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.557e+01 | 0.0000 | 47.0 | 5.80% | 1198.5 | 2.50% | motif file (matrix) |
svg |
29 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-6 | -1.550e+01 | 0.0000 | 47.0 | 5.80% | 1201.3 | 2.51% | motif file (matrix) |
svg |
30 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.464e+01 | 0.0000 | 116.0 | 14.32% | 4292.8 | 8.96% | motif file (matrix) |
svg |
31 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-5 | -1.370e+01 | 0.0000 | 14.0 | 1.73% | 162.7 | 0.34% | motif file (matrix) |
svg |
32 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-5 | -1.248e+01 | 0.0000 | 31.0 | 3.83% | 722.9 | 1.51% | motif file (matrix) |
svg |
33 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-5 | -1.178e+01 | 0.0001 | 8.0 | 0.99% | 57.0 | 0.12% | motif file (matrix) |
svg |
34 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.123e+01 | 0.0001 | 49.0 | 6.05% | 1496.8 | 3.12% | motif file (matrix) |
svg |
35 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-4 | -1.109e+01 | 0.0002 | 98.0 | 12.10% | 3752.4 | 7.83% | motif file (matrix) |
svg |
36 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -1.082e+01 | 0.0002 | 32.0 | 3.95% | 826.7 | 1.73% | motif file (matrix) |
svg |
37 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-4 | -9.295e+00 | 0.0009 | 42.0 | 5.19% | 1314.5 | 2.74% | motif file (matrix) |
svg |
38 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-3 | -8.998e+00 | 0.0012 | 10.0 | 1.23% | 134.3 | 0.28% | motif file (matrix) |
svg |
39 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-3 | -8.969e+00 | 0.0012 | 23.0 | 2.84% | 561.0 | 1.17% | motif file (matrix) |
svg |
40 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.957e+00 | 0.0012 | 32.0 | 3.95% | 914.2 | 1.91% | motif file (matrix) |
svg |
41 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.914e+00 | 0.0012 | 77.0 | 9.51% | 2950.8 | 6.16% | motif file (matrix) |
svg |
42 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -8.693e+00 | 0.0015 | 28.0 | 3.46% | 766.5 | 1.60% | motif file (matrix) |
svg |
43 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.642e+00 | 0.0015 | 37.0 | 4.57% | 1140.2 | 2.38% | motif file (matrix) |
svg |
44 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-3 | -8.437e+00 | 0.0018 | 97.0 | 11.98% | 3983.7 | 8.32% | motif file (matrix) |
svg |
45 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.092e+00 | 0.0025 | 21.0 | 2.59% | 521.6 | 1.09% | motif file (matrix) |
svg |
46 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.915e+00 | 0.0029 | 17.0 | 2.10% | 381.6 | 0.80% | motif file (matrix) |
svg |
47 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-3 | -7.295e+00 | 0.0053 | 84.0 | 10.37% | 3467.1 | 7.24% | motif file (matrix) |
svg |
48 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-3 | -7.065e+00 | 0.0065 | 16.0 | 1.98% | 375.7 | 0.78% | motif file (matrix) |
svg |
49 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -6.949e+00 | 0.0071 | 50.0 | 6.17% | 1849.0 | 3.86% | motif file (matrix) |
svg |
50 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.811e+00 | 0.0080 | 42.0 | 5.19% | 1488.3 | 3.11% | motif file (matrix) |
svg |
51 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.697e+00 | 0.0088 | 68.0 | 8.40% | 2741.6 | 5.72% | motif file (matrix) |
svg |
52 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.152e+00 | 0.0149 | 10.0 | 1.23% | 195.4 | 0.41% | motif file (matrix) |
svg |
53 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.843e+00 | 0.0199 | 25.0 | 3.09% | 797.2 | 1.66% | motif file (matrix) |
svg |
54 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.841e+00 | 0.0199 | 38.0 | 4.69% | 1384.0 | 2.89% | motif file (matrix) |
svg |
55 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.709e+00 | 0.0220 | 49.0 | 6.05% | 1918.2 | 4.00% | motif file (matrix) |
svg |
56 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -5.606e+00 | 0.0239 | 99.0 | 12.22% | 4466.6 | 9.32% | motif file (matrix) |
svg |
57 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.537e+00 | 0.0252 | 56.0 | 6.91% | 2279.4 | 4.76% | motif file (matrix) |
svg |
58 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.490e+00 | 0.0259 | 26.0 | 3.21% | 864.2 | 1.80% | motif file (matrix) |
svg |
59 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.432e+00 | 0.0270 | 8.0 | 0.99% | 149.8 | 0.31% | motif file (matrix) |
svg |
60 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -5.355e+00 | 0.0287 | 6.0 | 0.74% | 90.5 | 0.19% | motif file (matrix) |
svg |
61 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-2 | -5.240e+00 | 0.0316 | 29.0 | 3.58% | 1017.7 | 2.12% | motif file (matrix) |
svg |
62 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.984e+00 | 0.0402 | 82.0 | 10.12% | 3675.5 | 7.67% | motif file (matrix) |
svg |
63 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.976e+00 | 0.0402 | 46.0 | 5.68% | 1849.4 | 3.86% | motif file (matrix) |
svg |
64 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.774e+00 | 0.0480 | 42.0 | 5.19% | 1675.8 | 3.50% | motif file (matrix) |
svg |
65 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.739e+00 | 0.0490 | 72.0 | 8.89% | 3193.6 | 6.67% | motif file (matrix) |
svg |