Information for 11-TGHAGTGTATTTA (Motif 13)

A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G A T G T C A A G T C C G T A G T A C C G A T C T G A G T A C G T C A
p-value:1e-7
log p-value:-1.745e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.1 +/- 22.1bp
Average Position of motif in Background65.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGHAGTGTATTTA
-NNTGTGGATTSS
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGHAGTGTATTTA----
-GGACTGAATTCATGCC
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGHAGTGTATTTA-
---TGTGGATTNNN
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGHAGTGTATTTA--
NNNTATTGAATTGNNN
 A C G T A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGHAGTGTATTTA-
-------TGTTTAC
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGHAGTGTATTTA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGHAGTGTATTTA-
-------TGTTTAC
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGHAGTGTATTTA---
-CCATTGTATGCAAAT
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGHAGTGTATTTA-----
------DGWTTTATGRCN
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGHAGTGTATTTA------
--NNNGGTAATTATNGNGN
 A C G T A C T G G A C T C G T A A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A