Information for 3-AAGTGAGCCTTTGGAA (Motif 10)

C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C G T A C G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G T C C G T A A G T C A C G T A G C T
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 10.7bp
Average Position of motif in Background59.8 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGAGCCTTTGGAA
NNNGTGACCTTTGNNN-
 A C G T C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGAGCCTTTGGAA
NNNNTGACCTTTNNNN-
 A C G T C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:AAGTGAGCCTTTGGAA--
--------CSTGGGAAAD
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.48
Offset:3
Orientation:forward strand
Alignment:AAGTGAGCCTTTGGAA--
---ATTGCCTCAGGCAAT
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

Vdr/MA0693.1/Jaspar

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AAGTGAGCCTTTGGAA---
---TGAACTCNATGAACTC
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:AAGTGAGCCTTTGGAA--
-----------TGGAAAA
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:AAGTGAGCCTTTGGAA---
---------NNTGGAAANN
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:AAGTGAGCCTTTGGAA---
---TAAGCCACTTGAAATT
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AAGTGAGCCTTTGGAA
--ATAATCCC------
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AAGTGAGCCTTTGGAA
---TGACCYCT-----
 C T G A C G T A A C T G C G A T A C T G C G T A A T C G A G T C A G T C A C G T A G C T A C G T A C T G A C T G C G T A C G T A
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T