Information for 6-AWWATCAATANTG (Motif 6)

C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
Reverse Opposite:
A G T C C G T A C T G A A C G T C T G A A C G T A C G T A C T G C G T A C G A T C G A T C G T A A C G T
p-value:1e-13
log p-value:-3.073e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 20.3bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AWWATCAATANTG
AAAAAATCAATAAT-
 A C G T A C G T C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AWWATCAATANTG
AAAAAATCGATAAT-
 A C G T A C G T C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AWWATCAATANTG
AAAAAATCGATAAT-
 A C G T A C G T C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AWWATCAATANTG-
NNTNNCAATATTAG
 C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AWWATCAATANTG-
NNTNNCAATATTAG
 C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AWWATCAATANTG
-TAATCGATAA--
 C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AWWATCAATANTG
-TAATCGATAA--
 C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AWWATCAATANTG
HNRAATCAAT----
 A C G T C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AWWATCAATANTG
-DGATCRATAN--
 C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AWWATCAATANTG
---ATGAATATTC
 C G T A C G A T C G T A C G T A A C G T A G T C C G T A C G T A A G C T C G T A A G C T A C G T C T A G
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C