Information for 5-GTCAGTGAAA (Motif 3)

A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A
Reverse Opposite:
A G C T A C G T A C G T A T G C G C T A T A G C C G A T A C T G G T C A T G A C
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.659
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.99%
Number of Background Sequences with motif1135.4
Percentage of Background Sequences with motif2.38%
Average Position of motif in Targets50.9 +/- 28.5bp
Average Position of motif in Background49.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGAAA--
GAAAGTGAAAGT
 A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGTGAAA--
NANTTCATTGAATTA
 A C G T A C G T A C G T A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCAGTGAAA--
GGAAGTGAAAST
 A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCAGTGAAA----
AGAAAGTGAAAGTGA
 A C G T A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTCAGTGAAA---
---ACTGAAACCA
 A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCAGTGAAA--
GAAAGTGAAAGT
 A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCAGTGAAA-
CGGAAGTGAAAC
 A C G T A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCAGTGAAA--
GRAASTGAAAST
 A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCAGTGAAA--
GAAACTGAAACT
 A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGTGAAA-
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C T G C A G T T G A C G C T A A T C G C G A T T A C G T G C A T G C A T C G A A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G