Information for 8-AGTTATGAAA (Motif 7)

C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T A G T C C G T A C A G T C G T A C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.274e+01
Information Content per bp:1.865
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif61.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets39.2 +/- 27.4bp
Average Position of motif in Background57.2 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGTTATGAAA-
-RTTATGYAAB
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTTATGAAA-
NATTGTGCAAT
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTTATGAAA-
GGTAATAAAAA
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGTTATGAAA----
AGAGCCATAAAATTCG
 A C G T A C G T C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGTTATGAAA-
-GTCATAAAAN
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTTATGAAA----
AAATAAGAAAAAAC
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTTATGAAA---
TAAGGTAATAAAATTA
 A C G T A C G T A C G T C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGTTATGAAA---
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGTTATGAAA
AGGTGTGAAA
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

NFIL3/MA0025.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTTATGAAA---
--TTATGTAACAT
 C G T A A C T G A C G T G C A T G T C A A C G T C T A G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T