Information for 7-CTGATGAAGG (Motif 6)

A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G
Reverse Opposite:
T A G C A G T C A G C T C A G T A G T C G T C A A G C T G T A C C G T A T C A G
p-value:1e-10
log p-value:-2.382e+01
Information Content per bp:1.838
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif148.7
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets40.8 +/- 29.8bp
Average Position of motif in Background46.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGATGAAGG
ATGATGCAAT
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGATGAAGG
MTGATGCAAT
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CTGATGAAGG----
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGATGAAGG
----NGAAGC
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGATGAAGG
--GATGACGT
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G
A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGATGAAGG--
ATGATKGATGRC
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGATGAAGG-
-TGATTGATGA
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGATGAAGG-
NNTNTCATGAATGT
 A C G T A C G T A C G T A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTGATGAAGG-
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGATGAAGG---
-TGATTRATGGCY
 A G T C C G A T A C T G C T G A A C G T A C T G G T C A C T G A A C T G A T C G A C G T A C G T A C G T
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C