Information for 6-TAATAAGTTC (Motif 5)

A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G T C A A T G C C G A T A G C T C T G A A G C T A C G T C G T A
p-value:1e-12
log p-value:-2.981e+01
Information Content per bp:1.869
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.5 +/- 24.5bp
Average Position of motif in Background61.8 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAATAAGTTC
NTAATGAGCT-
 A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

PH0028.1_En1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TAATAAGTTC--
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TAATAAGTTC--
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAATAAGTTC
TTAATTAG---
 A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

PH0058.1_Hoxb3/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TAATAAGTTC-
TNNNACTAATTAGNTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATAAGTTC--
ACGGTAATTAGCTCAG
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TAATAAGTTC--
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

GSX1/MA0892.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAATAAGTTC
NNTAATTAGN--
 A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C
C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G A C G T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TAATAAGTTC--
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T

PH0154.1_Prrx1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TAATAAGTTC-
ANNAGTTAATTAGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A G C T C T G A C G T A A T C G A C G T A C G T A G T C A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C