Information for 7-GSNAACTGCAGGY (Motif 4)

A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C G T A C G T G A C T A T G C A G T C
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.857
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.9 +/- 19.9bp
Average Position of motif in Background36.8 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GSNAACTGCAGGY--
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GSNAACTGCAGGY
GGGAATTGTAGT-
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GSNAACTGCAGGY----
-----SDGCAGGTGCNS
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GSNAACTGCAGGY
CGACCAACTGCCGTG
 A C G T A C G T A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GSNAACTGCAGGY
-NHAACBGYYV--
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GSNAACTGCAGGY
--DCTCAGCAGG-
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GSNAACTGCAGGY--
---CACAGCAGGGGG
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GSNAACTGCAGGY---
------NNCAGGTGNN
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GSNAACTGCAGGY--
------AACAGGTGT
 A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-10
Orientation:reverse strand
Alignment:----------GSNAACTGCAGGY
TGGCCANNNNNGGAACTGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A C G T A G T C A G T A C A C G T C T A G A G T C C G T A A C T G A C T G A G T C
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T