Information for 5-GCCCCNCCTGAGAAGC (Motif 7)

C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
Reverse Opposite:
A C T G A T G C A G C T C G A T A G T C A G C T A T G C C T G A A C T G A T C G A C G T C T A G A C T G A C T G C T A G A G T C
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.677
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif50.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.0 +/- 21.8bp
Average Position of motif in Background55.1 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCCCNCCTGAGAAGC
GGCCYCCTGCTGDGH---
 A C G T A C G T C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCCCNCCTGAGAAGC
-CCTCACCTG------
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCCCNCCTGAGAAGC
CCCCCTGCTGTG----
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCCCNCCTGAGAAGC
--NNCACCTGNN----
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCCCNCCTGAGAAGC
---CCTGCTGAGH---
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCCNCCTGAGAAGC
TNTCCTGCTGTGNNG-
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCCCNCCTGAGAAGC
TCNCCTGCTGNGNNN-
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCCCNCCTGAGAAGC
--AACACCTGCT----
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCCCNCCTGAGAAGC
--CGCACCTGCT----
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCCCNCCTGAGAAGC
--ACCACCTGTT----
 C T A G A G T C T G A C T G A C A G T C C G T A T A G C A G T C A G C T A T C G T C G A T C A G C G T A C T G A A T C G T G A C
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T