Information for 3-TAWGTAAACA (Motif 3)

G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A
Reverse Opposite:
C A G T C T A G C G A T A G C T C A G T C T G A A T G C G C T A A G C T C G T A
p-value:1e-29
log p-value:-6.802e+01
Information Content per bp:1.608
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif10.21%
Number of Background Sequences with motif1053.0
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets46.0 +/- 25.1bp
Average Position of motif in Background49.3 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TAWGTAAACA
AAAGTAAACA
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TAWGTAAACA
AAAGTAAACA
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-TAWGTAAACA----
CAAAGTAAACANNNN
 A C G T G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TAWGTAAACA--
TATGTAAACANG
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TAWGTAAACA
WAAGTAAAYA
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TAWGTAAACA
NCTAAGTAAACA
 A C G T A C G T G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TAWGTAAACA--
TAAGTAAACAAA
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--TAWGTAAACA---
NCWRWGTAAACANSV
 A C G T A C G T G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TAWGTAAACA-
TATGTAAATAT
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.90
Offset:3
Orientation:forward strand
Alignment:TAWGTAAACA
---GTAAACA
 G C A T T C G A C G A T T A C G G A C T G T C A T C G A C G T A G A T C G T C A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A