Information for 7-CTCCCAACASAGGGAG (Motif 20)

A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G
Reverse Opposite:
A G T C A G C T A G T C A G T C T G A C A G C T A T C G A C G T A C T G A C G T G C A T C T A G A C T G A C T G T C G A A T C G
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.653
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif62.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets44.3 +/- 26.5bp
Average Position of motif in Background53.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG------
--GCCASCAGGGGGCGCYVNNG
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCCAACASAGGGAG---
TGGCCACCAGGGGGCGCTA
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTCCCAACASAGGGAG-
-------AACAGGAAGT
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG----
TGGCCACCAGGTGGCACTNT
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG
--CCCCCCCGGGGGNN
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG
-----AACAAAGG---
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG-----
-----------GGGAGGACNG
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG
-----AACAGATGGT-
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTCCCAACASAGGGAG
--CACAGCAGGGGG--
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.51
Offset:11
Orientation:reverse strand
Alignment:CTCCCAACASAGGGAG-
-----------CGGAGC
 A T G C A G C T T G A C T A G C A G T C C G T A T G C A G T A C T C G A T A G C C T G A A C T G C T A G T A C G C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C