Information for 9-AGAGCAATGBTTA (Motif 7)

C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
Reverse Opposite:
A G C T C T G A C T G A T G A C A G T C C G T A A C G T A C G T A C T G A G T C A G C T G T A C C G A T
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.790
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 23.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAGCAATGBTTA
TAGGGCAAAGGTCA
 A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGAGCAATGBTTA
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAATGBTTA
AGAGTCCAAAGTCCA
 A C G T A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAATGBTTA
GTAGGGCAAAGGTCA
 A C G T A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAGCAATGBTTA
---GCAGTGATTT
 C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGAGCAATGBTTA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCAATGBTTA
TGGGGCAAAGGTCA
 A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAATGBTTA
AAAGATCAAAGGGTT
 A C G T A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGCAATGBTTA
AAAACAATGG---
 C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGAGCAATGBTTA
AAAGATCAAAGG---
 A C G T A C G T C G T A A C T G C T G A A C T G A G T C C G T A G T C A C G A T A C T G A C T G A G C T A G C T C T G A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T